birA_4 protein (Streptomyces turgidiscabies)

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Score

birA_4

Bifunctional ligase/repressor BirA. (342 aa)

Predicted Functional Partners:

T45_04539

0.664

rbpA_2

0.580

rpoC

0.560

rpoB_1

0.560

rpoZ

0.560

rpoA_1

0.493

rpoB_2

0.493

rpoA_2

0.493

hrdA

0.457

sigA

0.457

Your Current Organism:

Streptomyces turgidiscabies

NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T45_04539	birA_4	T45_04539	T45_04538	Soluble epoxide hydrolase.	Bifunctional ligase/repressor BirA.	0.664
birA_4	T45_04539	T45_04538	T45_04539	Bifunctional ligase/repressor BirA.	Soluble epoxide hydrolase.	0.664
birA_4	hrdA	T45_04538	T45_00394	Bifunctional ligase/repressor BirA.	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.457
birA_4	rbpA_2	T45_04538	T45_08155	Bifunctional ligase/repressor BirA.	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.580
birA_4	rpoA_1	T45_04538	T45_04383	Bifunctional ligase/repressor BirA.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.493
birA_4	rpoA_2	T45_04538	T45_08564	Bifunctional ligase/repressor BirA.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.493
birA_4	rpoB_1	T45_04538	T45_07178	Bifunctional ligase/repressor BirA.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.560
birA_4	rpoB_2	T45_04538	T45_07639	Bifunctional ligase/repressor BirA.	DNA-directed RNA polymerase subunit beta.	0.493
birA_4	rpoC	T45_04538	T45_07177	Bifunctional ligase/repressor BirA.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.560
birA_4	rpoZ	T45_04538	T45_08441	Bifunctional ligase/repressor BirA.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.560
birA_4	sigA	T45_04538	T45_02381	Bifunctional ligase/repressor BirA.	RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.457
hrdA	birA_4	T45_00394	T45_04538	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Bifunctional ligase/repressor BirA.	0.457
hrdA	rbpA_2	T45_00394	T45_08155	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.999
hrdA	rpoA_1	T45_00394	T45_04383	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
hrdA	rpoA_2	T45_00394	T45_08564	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
hrdA	rpoB_1	T45_00394	T45_07178	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
hrdA	rpoB_2	T45_00394	T45_07639	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta.	0.920
hrdA	rpoC	T45_00394	T45_07177	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
hrdA	rpoZ	T45_00394	T45_08441	RNA polymerase principal sigma factor HrdA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rbpA_2	birA_4	T45_08155	T45_04538	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	Bifunctional ligase/repressor BirA.	0.580