Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_04556Short chain dehydrogenase. (195 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 
 0.933
fas6_1
LOG family protein ORF6 in fasciation locus.
  
 
 0.798
pks2
Phthioceranic/hydroxyphthioceranic acid.
  
 
 0.790
T45_04647
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 
 0.782
fabD-2
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 
 0.782
lgrD_2
Linear gramicidin synthase subunit D.
  
 
 0.779
T45_06353
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 
 0.779
cmdD_1
Chondramide synthase cmdD.
  
  0.765
accA
Acetyl-coenzyme A carboxylase carboxyl.
    
  0.761
ppsE_1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE.
  
 
 0.754
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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