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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uidA_2Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (682 aa)    
Predicted Functional Partners:
chiA2_1
Chitinase precursor.
 
  
 0.722
T45_04566
Sugar-binding cellulase-like protein.
       0.700
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.696
agaA_4
Alpha-galactosidase A precursor.
 
  
  0.667
abfA
Intracellular.
    
 0.640
agaA_2
Alpha-galactosidase A precursor.
 
  
 0.633
mro_1
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
 
 0.632
mro_2
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
 
 0.631
agaA_1
Alpha-galactosidase A precursor.
 
  
 0.612
agaA_3
Alpha-galactosidase A precursor.
 
  
 0.604
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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