Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
uidA_2Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (682 aa)    
Predicted Functional Partners:
chiA2_1
Chitinase precursor.
 
  
 0.704
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.669
T45_04566
Sugar-binding cellulase-like protein.
       0.659
agaA_4
Alpha-galactosidase A precursor.
 
  
  0.642
agaA_2
Alpha-galactosidase A precursor.
 
  
 0.618
abfA
Intracellular.
    
 0.601
strH
beta-N-acetylhexosaminidase precursor.
 
 0.599
mro_1
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
 
 0.597
agaA_1
Alpha-galactosidase A precursor.
 
  
 0.596
mro_2
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
 
 0.596
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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