STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdmFormaldehyde dismutase. (394 aa)    
Predicted Functional Partners:
T45_07031
Alcohol dehydrogenase.
 
 
0.885
adh_1
Alcohol dehydrogenase.
  
  
 
0.867
fruA
PTS system fructose-specific EIIABC component.
  
 
 0.854
ndoR
ferredoxin--NAD(P) (+) reductase (naphthalene dioxygenase ferredoxin-specific); Belongs to the globin family.
   
 
  0.767
pamO
Phenylacetone monooxygenase.
    
  0.759
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.739
adhE
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.694
T45_02864
Alcohol dehydrogenase.
 
 
0.660
T45_07888
Alcohol dehydrogenase.
 
 
0.653
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
   0.647
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.