Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_04622stearoyl-CoA 9-desaturase electron transfer. (336 aa)    
Predicted Functional Partners:
desA3
stearoyl-CoA 9-desaturase.
 
 0.999
narB_2
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.953
fadH
2,4-dienoyl-CoA reductase [NADPH].
 
 
 0.947
T45_03244
Fatty acid desaturase.
  
 
 0.933
pks2
Phthioceranic/hydroxyphthioceranic acid.
  
 0.918
sir
Sulfite reductase [ferredoxin]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.906
dhbF_8
Dimodular nonribosomal peptide synthase.
   
 0.905
nifU
NifU-like protein.
  
 0.896
mlr_1
4-methylaminobutanoate oxidase; Belongs to the GcvT family.
  
 
 0.888
desA1
Putative acyl-[acyl-carrier-protein] desaturase.
 
 
 0.885
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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