Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_04679Transcriptional regulator NarL. (268 aa)    
Predicted Functional Partners:
barA_2
Signal transduction histidine-protein kinase.
 
 
 0.972
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 0.920
T45_09072
Sensory histidine kinase AtoS.
  
 0.818
acsA_2
Acetyl-coenzyme A synthetase.
 
     0.643
lcfB_10
long-chain-fatty-acid--CoA ligase.
       0.551
T45_04678
Putative HTH-type transcriptional.
       0.522
rbsA_6
Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family.
     
  0.509
devS_2
Redox sensor histidine kinase response regulator.
  
 0.451
dosT
Hypoxia sensor histidine kinase response.
  
  0.443
devS_1
Redox sensor histidine kinase response regulator.
  
  0.443
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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