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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_04702IucA / IucC family protein. (505 aa)    
Predicted Functional Partners:
T45_04700
Hypothetical protein.
       0.817
T45_04701
Von Willebrand factor type A domain protein.
       0.817
iucC
Aerobactin synthase.
    
  0.806
holA
Hypothetical protein.
     
 0.805
iucA_2
citrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase, alpha subunit.
 
    
0.709
T45_04706
Rdx family protein.
       0.622
T45_01075
Hypothetical protein.
  
     0.620
ssi
Subtilisin inhibitor precursor.
  
     0.594
T45_06685
Leucine rich repeat variant.
  
     0.568
T45_01681
Hypothetical protein.
  
     0.554
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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