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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnaSA3Guanyl-specific ribonuclease Sa3 precursor. (131 aa)    
Predicted Functional Partners:
T45_08196
Barstar; Barnase inhibitor.
 
 
 0.989
T45_06156
Barstar; Barnase inhibitor.
  
 
 0.969
allB
Allantoinase.
       0.550
alc
Allantoicase; Belongs to the allantoicase family.
       0.550
guaB_6
Inosine-5'-monophosphate dehydrogenase.
       0.550
deoR_1
Deoxyribonucleoside regulator.
       0.550
T45_03558
Mannosyltransferase; PIG-V.
  
     0.498
efpA_4
Putative MFS-type transporter EfpA.
       0.459
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.431
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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