Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_04739Metal-dependent hydrolase. (210 aa)    
Predicted Functional Partners:
xthA
Exodeoxyribonuclease III.
       0.815
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
   0.647
catD_2
3-oxoadipate enol-lactonase 2.
       0.613
dhbF_8
Dimodular nonribosomal peptide synthase.
  
  
 0.551
fruA
PTS system fructose-specific EIIABC component.
 
  
 0.550
glkA_2
Glucokinase.
       0.519
T45_04728
Hypothetical protein.
       0.519
T45_04742
Hypothetical protein.
       0.519
yjfF_2
Inner membrane ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.518
mglA_3
Galactose/methyl galactoside import ATP-binding protein.
       0.518
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.