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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfrABeta-fructosidase. (435 aa)    
Predicted Functional Partners:
fruA
PTS system fructose-specific EIIABC component.
  
 
 0.964
licH
Putative 6-phospho-beta-glucosidase.
     
 0.899
aglB
6-phospho-alpha-glucosidase.
     
 0.899
yicI_4
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
     
 0.899
agaA_3
Alpha-galactosidase A precursor.
    
 0.861
malL_2
Oligo-1,6-glucosidase.
 
 
 0.857
rafA_5
Alpha-galactosidase.
 
  
 0.856
rafA_2
Alpha-galactosidase.
 
  
 0.854
rafA_3
Alpha-galactosidase.
 
  
 0.852
rafA_4
Alpha-galactosidase.
 
  
 0.847
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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