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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_04780ADP-ribosylglycohydrolase. (361 aa)    
Predicted Functional Partners:
T45_04779
NUDIX domain protein.
       0.812
garK
Glycerate 2-kinase; Belongs to the glycerate kinase type-1 family.
       0.770
T45_04038
ADP-ribosylglycohydrolase.
  
     0.767
msmE_4
Multiple sugar-binding protein precursor.
  
     0.717
T45_05366
Phage portal protein.
    
   0.683
glnB_1
Nitrogen regulatory protein P-II.
    
 
 0.583
glnB_2
Nitrogen regulatory protein P-II.
    
 
 0.583
cobB_2
NAD-dependent protein deacetylase.
       0.550
T45_02637
Putative FAD-binding dehydrogenase.
  
     0.490
ycjO_2
Inner membrane ABC transporter permease protein.
  
     0.446
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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