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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccrA2crotonyl-CoA reductase. (447 aa)    
Predicted Functional Partners:
paaZ
Bifunctional protein PaaZ.
 
  0.972
mutB_2
methylmalonyl-CoA mutase large subunit.
 
   
 0.969
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.945
mmgC_12
acyl-CoA dehydrogenase.
 
 
 0.928
mcl1
malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
  0.918
fadJ_2
Fatty acid oxidation complex subunit alpha.
  
 0.909
adhE
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.907
echA8_3
Putative enoyl-CoA hydratase echA8.
    
  0.900
caiD_4
carnitinyl-CoA dehydratase.
    
  0.900
echA8_8
Putative enoyl-CoA hydratase echA8.
    
  0.900
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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