Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phhBPutative pterin-4-alpha-carbinolamine. (101 aa)    
Predicted Functional Partners:
rlmA_2
23S rRNA (guanine(745-N(1))-methyltransferase.
       0.843
T45_04849
Helix-turn-helix protein.
       0.726
yesW
Rhamnogalacturonan endolyase YesW precursor.
       0.679
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
  
 0.675
lly
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.544
mce
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein.
  
  
 0.540
T45_02355
4-hydroxymandelate synthase.
  
  
 0.540
hpd
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.540
T45_06336
Helix-turn-helix protein.
       0.519
sodF1
Superoxide dismutase [Fe-Zn] 1; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.512
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (24%) [HD]