Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yteRUnsaturated rhamnogalacturonyl hydrolase YteR. (397 aa)    
Predicted Functional Partners:
T45_04864
Hypothetical protein.
 
     0.901
T45_04865
F5/8 type C domain protein.
 
     0.898
xynB_9
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
     0.875
chiA2_1
Chitinase precursor.
 
  
  0.871
csxA_2
exo-beta-D-glucosaminidase precursor.
 
     0.798
rhgT_1
Rhamnogalacturonan acetylesterase RhgT.
  
  
  0.777
rhgT_2
Rhamnogalacturonan acetylesterase RhgT.
  
  
  0.756
T45_00707
Hypothetical protein.
  
     0.719
abnA
Extracellular endo-alpha-(1->5-L-arabinanase 1; Belongs to the glycosyl hydrolase 43 family.
 
     0.702
T45_04425
Hypothetical protein.
  
     0.659
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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