Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_04864 | T45_04865 | T45_04864 | T45_04865 | Hypothetical protein. | F5/8 type C domain protein. | 0.941 |
T45_04864 | chiA2_1 | T45_04864 | T45_04866 | Hypothetical protein. | Chitinase precursor. | 0.866 |
T45_04864 | csxA_2 | T45_04864 | T45_04867 | Hypothetical protein. | exo-beta-D-glucosaminidase precursor. | 0.770 |
T45_04864 | yteR | T45_04864 | T45_04863 | Hypothetical protein. | Unsaturated rhamnogalacturonyl hydrolase YteR. | 0.909 |
T45_04865 | T45_04864 | T45_04865 | T45_04864 | F5/8 type C domain protein. | Hypothetical protein. | 0.941 |
T45_04865 | chiA2_1 | T45_04865 | T45_04866 | F5/8 type C domain protein. | Chitinase precursor. | 0.884 |
T45_04865 | csxA_2 | T45_04865 | T45_04867 | F5/8 type C domain protein. | exo-beta-D-glucosaminidase precursor. | 0.841 |
T45_04865 | yteR | T45_04865 | T45_04863 | F5/8 type C domain protein. | Unsaturated rhamnogalacturonyl hydrolase YteR. | 0.907 |
acoA | csxA_2 | T45_02982 | T45_04867 | Acetoin:2,6-dichlorophenolindophenol. | exo-beta-D-glucosaminidase precursor. | 0.673 |
acoA | gdhB_1 | T45_02982 | T45_05654 | Acetoin:2,6-dichlorophenolindophenol. | Quinoprotein glucose dehydrogenase B precursor. | 0.702 |
acoA | tpiA | T45_02982 | T45_04148 | Acetoin:2,6-dichlorophenolindophenol. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.647 |
chiA2_1 | T45_04864 | T45_04866 | T45_04864 | Chitinase precursor. | Hypothetical protein. | 0.866 |
chiA2_1 | T45_04865 | T45_04866 | T45_04865 | Chitinase precursor. | F5/8 type C domain protein. | 0.884 |
chiA2_1 | csxA_2 | T45_04866 | T45_04867 | Chitinase precursor. | exo-beta-D-glucosaminidase precursor. | 0.789 |
chiA2_1 | yteR | T45_04866 | T45_04863 | Chitinase precursor. | Unsaturated rhamnogalacturonyl hydrolase YteR. | 0.883 |
csxA_2 | T45_04864 | T45_04867 | T45_04864 | exo-beta-D-glucosaminidase precursor. | Hypothetical protein. | 0.770 |
csxA_2 | T45_04865 | T45_04867 | T45_04865 | exo-beta-D-glucosaminidase precursor. | F5/8 type C domain protein. | 0.841 |
csxA_2 | acoA | T45_04867 | T45_02982 | exo-beta-D-glucosaminidase precursor. | Acetoin:2,6-dichlorophenolindophenol. | 0.673 |
csxA_2 | chiA2_1 | T45_04867 | T45_04866 | exo-beta-D-glucosaminidase precursor. | Chitinase precursor. | 0.789 |
csxA_2 | gdhB_1 | T45_04867 | T45_05654 | exo-beta-D-glucosaminidase precursor. | Quinoprotein glucose dehydrogenase B precursor. | 0.655 |
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