Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_04868long-chain-fatty-acid--CoA ligase FadD15. (608 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 
 0.864
barA_2
Signal transduction histidine-protein kinase.
  
 
  0.777
T45_06351
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
    
 0.700
T45_00539
long-chain-fatty-acid--CoA ligase FadD15.
  
  
 
0.699
baiB
Bile acid-coenzyme A ligase.
  
  
  0.692
lcfB_6
long-chain-fatty-acid--CoA ligase.
  
  
  0.678
T45_05201
long-chain-fatty-acid--CoA ligase FadD13.
  
  
 
0.663
accD5_1
Putative propionyl-CoA carboxylase beta chain 5.
    
  0.636
T45_01570
Hypothetical protein.
     
  0.631
pksN
Polyketide synthase PksN; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.622
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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