Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbsC_5Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (339 aa)    
Predicted Functional Partners:
ytfQ_2
ABC transporter periplasmic-binding protein YtfQ.
 
 0.996
araG_3
Arabinose import ATP-binding protein AraG.
 
  0.986
araG_2
Arabinose import ATP-binding protein AraG.
 
  0.975
rbsB_4
D-ribose-binding periplasmic protein precursor.
 
 0.959
rbsB_2
D-ribose-binding periplasmic protein precursor.
 
 0.951
rbsA_4
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.941
rbsA_2
Ribose import ATP-binding protein RbsA.
 
  0.940
rbsA_7
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.940
rbsB_1
D-ribose-binding periplasmic protein precursor.
 
 0.939
rbsA_9
Ribose import ATP-binding protein RbsA.
 
  0.939
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (30%) [HD]