Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
iolE_2Inosose dehydratase. (334 aa)    
Predicted Functional Partners:
ntdC
Glucose-6-phosphate 3-dehydrogenase.
 
  
 0.948
yliI
Soluble aldose sugar dehydrogenase YliI.
    
 0.855
ytfQ_2
ABC transporter periplasmic-binding protein YtfQ.
 
     0.842
fruA
PTS system fructose-specific EIIABC component.
  
 
  0.800
rbsC_5
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
    0.760
T45_04885
Trehalose utilization.
       0.733
T45_04892
Xylose isomerase-like TIM barrel.
 
     0.675
T45_04888
Hypothetical protein.
       0.657
afr_1
1,5-anhydro-D-fructose reductase.
 
  
 0.588
xylA_1
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.579
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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