Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ino1_2Inositol-3-phosphate synthase. (414 aa)    
Predicted Functional Partners:
ulaE_2
L-ribulose-5-phosphate 3-epimerase UlaE.
 
     0.948
T45_04888
Hypothetical protein.
 
     0.948
T45_04889
TatD related DNase.
 
     0.929
T45_04890
Xylose isomerase-like TIM barrel.
 
     0.920
suhB_2
Inositol-1-monophosphatase.
   
 
 0.902
suhB_3
Inositol-1-monophosphatase.
   
 
 0.892
yliI
Soluble aldose sugar dehydrogenase YliI.
 
     0.831
ino1_1
Inositol-3-phosphate synthase.
  
  
  0.826
pgsA
CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.822
suhB_1
Inositol-1-monophosphatase.
   
 
 0.801
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.