Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ulaE_2L-ribulose-5-phosphate 3-epimerase UlaE. (388 aa)    
Predicted Functional Partners:
T45_04888
Hypothetical protein.
     0.968
ino1_2
Inositol-3-phosphate synthase.
 
     0.948
T45_04889
TatD related DNase.
 
    0.944
T45_04890
Xylose isomerase-like TIM barrel.
 
     0.944
yliI
Soluble aldose sugar dehydrogenase YliI.
 
  
 0.869
T45_05493
Hypothetical protein.
     0.851
T45_00407
Hypothetical protein.
     0.818
fruA
PTS system fructose-specific EIIABC component.
  
 
  0.800
T45_00409
Prenyltransferase.
 
     0.789
T45_05491
Prenyltransferase.
 
     0.789
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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