STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_04900Hypothetical protein. (407 aa)    
Predicted Functional Partners:
spoVK_1
Stage V sporulation protein K.
 
 
 0.821
T45_03536
ATPase family associated with various cellular activities.
 
 
 0.816
T45_04899
Hypothetical protein.
   
   0.793
ftsH_2
ATP-dependent zinc metalloprotease FtsH.
   
 0.791
ftsH_3
ATP-dependent zinc metalloprotease FtsH.
   
 0.791
spoVK_2
Stage V sporulation protein K.
   
 0.791
T45_07658
ATPase family associated with various cellular activities.
   
 0.791
eccA1
ESX-1 secretion system protein EccA1.
   
 0.791
lmrA
Multidrug resistance ABC transporter ATP-binding and permease protein.
  
  
  0.670
T45_00339
55.5 kDa and 49.5 kDa sporulation proteins.
  
     0.564
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.