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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yusV_3Putative siderophore transport system. (298 aa)    
Predicted Functional Partners:
fepD_3
Ferric enterobactin transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.994
hmuU_1
Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.983
hmuU_2
Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.983
yhfQ
Putative ABC transporter substrate-binding.
 
 0.980
fepD_1
Ferric enterobactin transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.977
fepD_2
Ferric enterobactin transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.977
yfhA
Putative siderophore transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.974
yfmC
Fe(3+)-citrate-binding protein YfmC precursor.
  
 0.908
yfiY
Putative siderophore-binding lipoprotein YfiY.
 
 
 0.899
T45_00474
Corrinoid ABC transporter substrate-binding protein.
 
 0.890
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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