Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_02496 | T45_03145 | T45_02496 | T45_03145 | Hypothetical protein. | Translocation protein TolB. | 0.468 |
T45_02496 | T45_03146 | T45_02496 | T45_03146 | Hypothetical protein. | Translocation protein TolB. | 0.468 |
T45_02496 | T45_04973 | T45_02496 | T45_04973 | Hypothetical protein. | Excalibur calcium-binding domain protein. | 0.444 |
T45_02496 | T45_05148 | T45_02496 | T45_05148 | Hypothetical protein. | Hypothetical protein. | 0.594 |
T45_02496 | T45_05857 | T45_02496 | T45_05857 | Hypothetical protein. | WD40-like Beta Propeller Repeat protein. | 0.468 |
T45_02496 | T45_06828 | T45_02496 | T45_06828 | Hypothetical protein. | Translocation protein TolB. | 0.550 |
T45_02496 | T45_07051 | T45_02496 | T45_07051 | Hypothetical protein. | Translocation protein TolB. | 0.468 |
T45_02496 | afsK_6 | T45_02496 | T45_04704 | Hypothetical protein. | Serine/threonine-protein kinase AfsK. | 0.493 |
T45_02496 | guaA_2 | T45_02496 | T45_07354 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.617 |
T45_03145 | T45_02496 | T45_03145 | T45_02496 | Translocation protein TolB. | Hypothetical protein. | 0.468 |
T45_03145 | T45_03146 | T45_03145 | T45_03146 | Translocation protein TolB. | Translocation protein TolB. | 0.851 |
T45_03145 | T45_04973 | T45_03145 | T45_04973 | Translocation protein TolB. | Excalibur calcium-binding domain protein. | 0.468 |
T45_03146 | T45_02496 | T45_03146 | T45_02496 | Translocation protein TolB. | Hypothetical protein. | 0.468 |
T45_03146 | T45_03145 | T45_03146 | T45_03145 | Translocation protein TolB. | Translocation protein TolB. | 0.851 |
T45_03146 | T45_04973 | T45_03146 | T45_04973 | Translocation protein TolB. | Excalibur calcium-binding domain protein. | 0.468 |
T45_03146 | T45_05857 | T45_03146 | T45_05857 | Translocation protein TolB. | WD40-like Beta Propeller Repeat protein. | 0.554 |
T45_04973 | T45_02496 | T45_04973 | T45_02496 | Excalibur calcium-binding domain protein. | Hypothetical protein. | 0.444 |
T45_04973 | T45_03145 | T45_04973 | T45_03145 | Excalibur calcium-binding domain protein. | Translocation protein TolB. | 0.468 |
T45_04973 | T45_03146 | T45_04973 | T45_03146 | Excalibur calcium-binding domain protein. | Translocation protein TolB. | 0.468 |
T45_04973 | T45_05148 | T45_04973 | T45_05148 | Excalibur calcium-binding domain protein. | Hypothetical protein. | 0.463 |
page 1 of 2