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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_05007TMAO/DMSO reductase. (378 aa)    
Predicted Functional Partners:
T45_05008
Hypothetical protein.
 
     0.970
T45_05153
Hypothetical protein.
 
     0.856
T45_05151
Hypothetical protein.
 
     0.815
wbiB
DTDP-L-rhamnose 4-epimerase.
 
     0.813
T45_05150
Undecaprenyl-phosphate mannosyltransferase.
 
     0.805
T45_03036
Hypothetical protein.
   
 0.803
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
   
 0.803
T45_05152
Mg-protoporphyrin IX methyl transferase.
 
    0.792
narB_2
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.745
lepB_2
Signal peptidase I; Belongs to the peptidase S26 family.
   
  
 0.621
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.