Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
T45_05010Tautomerase enzyme; Belongs to the 4-oxalocrotonate tautomerase family. (71 aa)    
Predicted Functional Partners:
amnF
2-oxopent-4-enoate hydratase.
    
 0.859
fabG_15
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
   
 0.827
betB_2
NAD/NADP-dependent betaine aldehyde; Belongs to the aldehyde dehydrogenase family.
    
 0.802
bphC_1
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase.
    
 0.698
bphC_2
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase.
     
  0.623
gbsA_1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.622
thcA
EPTC-inducible aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.622
puuC
Aldehyde dehydrogenase PuuC; Belongs to the aldehyde dehydrogenase family.
    
 0.622
xylG_4
2-hydroxymuconic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.622
gbsA_2
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.622
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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