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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_05022Ferric iron reductase FhuF-like transporter. (247 aa)    
Predicted Functional Partners:
glgA_2
Capsular glucan synthase.
       0.828
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.767
T45_05021
Hypothetical protein.
 
     0.737
T45_07288
Hypothetical protein.
  
     0.564
intPAI
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.550
T45_09233
Hypothetical protein.
  
     0.533
T45_05026
Putative diacylglycerol; Belongs to the long-chain O-acyltransferase family.
       0.505
T45_02690
Zinc carboxypeptidase.
  
     0.495
T45_08284
MarR family protein.
  
     0.480
T45_01277
Hypothetical protein.
  
     0.475
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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