STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsA_5Ribose import ATP-binding protein RbsA. (508 aa)    
Predicted Functional Partners:
rbsB_4
D-ribose-binding periplasmic protein precursor.
 
 0.972
rbsC_6
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  0.969
rbsC_4
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  0.927
lsrD
Autoinducer 2 import system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.921
rbsB_5
D-ribose-binding periplasmic protein precursor; Belongs to the binding-protein-dependent transport system permease family.
  0.921
rbsC_5
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  0.914
yjfF_1
Inner membrane ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.912
rbsC_3
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
  0.906
lsrC
Autoinducer 2 import system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.906
ytfT_1
Inner membrane ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.896
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.