Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xecE2-(S-hydroxypropyl-CoM dehydrogenase. (251 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.934
T45_05043
Amidohydrolase.
 
  
  0.917
fdh_3
D-threo-aldose 1-dehydrogenase.
 
     0.909
T45_05039
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.899
rhaM_3
L-rhamnose mutarotase.
 
     0.881
fas6_1
LOG family protein ORF6 in fasciation locus.
  
 0.851
cmdD_1
Chondramide synthase cmdD.
   
 0.837
lgrD_2
Linear gramicidin synthase subunit D.
  
 0.817
gltB_1
Glutamate synthase [NADPH] large chain.
     
 0.779
txtB
Thaxtomin synthase B.
   
 0.764
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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