Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_05065Hypothetical protein. (258 aa)    
Predicted Functional Partners:
plsC_5
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
  
 0.986
T45_05062
Succinate dehydrogenase/Fumarate reductase.
       0.711
frdA
Fumarate reductase flavoprotein subunit.
       0.711
frdB
Fumarate reductase iron-sulfur subunit.
       0.711
gltC_3
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
       0.657
T45_05077
Hypothetical protein.
       0.507
T45_09293
PRC-barrel domain protein.
  
    0.500
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.