STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_05100Hypothetical protein. (171 aa)    
Predicted Functional Partners:
yqiK_2
Inner membrane protein YqiK.
 
     0.892
T45_08903
Hypothetical protein.
  
     0.603
T45_01517
Hypothetical protein.
  
     0.565
T45_01208
Hypothetical protein.
  
     0.543
pezT
Toxin PezT.
  
     0.539
T45_01222
Hypothetical protein.
  
     0.524
T45_02278
Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family.
  
     0.522
T45_04059
26 kDa periplasmic immunogenic protein.
  
     0.519
T45_06666
Hypothetical protein.
  
     0.514
T45_04061
Hypothetical protein.
  
     0.475
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.