STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacF_21Lactose transport system permease protein LacF. (316 aa)    
Predicted Functional Partners:
lacG_5
Lactose transport system permease protein LacG.
  0.991
lacE_2
Lactose-binding protein precursor.
 
  0.985
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.985
lacG_3
Lactose transport system permease protein LacG.
  0.977
lacG_2
Lactose transport system permease protein LacG.
  0.969
lacE_1
Lactose-binding protein precursor.
 
  0.947
araN_5
Putative arabinose-binding protein precursor.
 
  0.934
araQ_5
L-arabinose transport system permease protein.
  0.931
araQ_3
L-arabinose transport system permease protein.
 
  0.930
araQ_16
L-arabinose transport system permease protein.
  0.930
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.