Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_05834 | T45_05835 | T45_05834 | T45_05835 | Ureidoglycolate lyase. | Hypothetical protein. | 0.736 |
T45_05834 | gltX | T45_05834 | T45_05833 | Ureidoglycolate lyase. | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.895 |
T45_05834 | yjjG | T45_05834 | T45_05831 | Ureidoglycolate lyase. | Pyrimidine 5'-nucleotidase YjjG. | 0.735 |
T45_05835 | T45_05834 | T45_05835 | T45_05834 | Hypothetical protein. | Ureidoglycolate lyase. | 0.736 |
T45_05835 | gltX | T45_05835 | T45_05833 | Hypothetical protein. | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.736 |
T45_05835 | yjjG | T45_05835 | T45_05831 | Hypothetical protein. | Pyrimidine 5'-nucleotidase YjjG. | 0.662 |
gltX | T45_05834 | T45_05833 | T45_05834 | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Ureidoglycolate lyase. | 0.895 |
gltX | T45_05835 | T45_05833 | T45_05835 | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Hypothetical protein. | 0.736 |
gltX | yjjG | T45_05833 | T45_05831 | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Pyrimidine 5'-nucleotidase YjjG. | 0.735 |
yjjG | T45_05834 | T45_05831 | T45_05834 | Pyrimidine 5'-nucleotidase YjjG. | Ureidoglycolate lyase. | 0.735 |
yjjG | T45_05835 | T45_05831 | T45_05835 | Pyrimidine 5'-nucleotidase YjjG. | Hypothetical protein. | 0.662 |
yjjG | gltX | T45_05831 | T45_05833 | Pyrimidine 5'-nucleotidase YjjG. | glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.735 |