Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_04622 | hmp_4 | T45_04622 | T45_05261 | stearoyl-CoA 9-desaturase electron transfer. | 3-ketosteroid-9-alpha-hydroxylase reductase. | 0.887 |
T45_04622 | iscS_1 | T45_04622 | T45_03912 | stearoyl-CoA 9-desaturase electron transfer. | Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family. | 0.917 |
T45_04622 | iscS_2 | T45_04622 | T45_05918 | stearoyl-CoA 9-desaturase electron transfer. | Cysteine desulfurase. | 0.917 |
T45_04622 | nifU | T45_04622 | T45_09242 | stearoyl-CoA 9-desaturase electron transfer. | NifU-like protein. | 0.947 |
T45_04622 | paaE | T45_04622 | T45_05184 | stearoyl-CoA 9-desaturase electron transfer. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.618 |
T45_04622 | pht2 | T45_04622 | T45_08775 | stearoyl-CoA 9-desaturase electron transfer. | Phthalate 4,5-dioxygenase oxygenase reductase. | 0.649 |
T45_04622 | pobB | T45_04622 | T45_05702 | stearoyl-CoA 9-desaturase electron transfer. | Phenoxybenzoate dioxygenase subunit beta. | 0.635 |
hmp_4 | T45_04622 | T45_05261 | T45_04622 | 3-ketosteroid-9-alpha-hydroxylase reductase. | stearoyl-CoA 9-desaturase electron transfer. | 0.887 |
hmp_4 | iscS_1 | T45_05261 | T45_03912 | 3-ketosteroid-9-alpha-hydroxylase reductase. | Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family. | 0.917 |
hmp_4 | iscS_2 | T45_05261 | T45_05918 | 3-ketosteroid-9-alpha-hydroxylase reductase. | Cysteine desulfurase. | 0.917 |
hmp_4 | nifU | T45_05261 | T45_09242 | 3-ketosteroid-9-alpha-hydroxylase reductase. | NifU-like protein. | 0.947 |
hmp_4 | paaE | T45_05261 | T45_05184 | 3-ketosteroid-9-alpha-hydroxylase reductase. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.898 |
hmp_4 | pht2 | T45_05261 | T45_08775 | 3-ketosteroid-9-alpha-hydroxylase reductase. | Phthalate 4,5-dioxygenase oxygenase reductase. | 0.897 |
hmp_4 | pobB | T45_05261 | T45_05702 | 3-ketosteroid-9-alpha-hydroxylase reductase. | Phenoxybenzoate dioxygenase subunit beta. | 0.894 |
hmp_4 | thcC | T45_05261 | T45_07150 | 3-ketosteroid-9-alpha-hydroxylase reductase. | Rhodocoxin. | 0.659 |
iscS_1 | T45_04622 | T45_03912 | T45_04622 | Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family. | stearoyl-CoA 9-desaturase electron transfer. | 0.917 |
iscS_1 | hmp_4 | T45_03912 | T45_05261 | Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family. | 3-ketosteroid-9-alpha-hydroxylase reductase. | 0.917 |
iscS_1 | iscS_2 | T45_03912 | T45_05918 | Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase. | 0.919 |
iscS_1 | moeZ | T45_03912 | T45_01814 | Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family. | Putative adenylyltransferase/sulfurtransferase. | 0.956 |
iscS_1 | nifU | T45_03912 | T45_09242 | Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family. | NifU-like protein. | 0.999 |
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