Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_01916 | rhtA_1 | T45_01916 | T45_06384 | CGNR zinc finger. | Threonine/homoserine exporter RhtA. | 0.402 |
T45_06383 | T45_06385 | T45_06383 | T45_06385 | EamA-like transporter family protein. | Clp amino terminal domain protein. | 0.475 |
T45_06383 | coxG | T45_06383 | T45_06387 | EamA-like transporter family protein. | toxin/MT0934. | 0.614 |
T45_06383 | rhtA_1 | T45_06383 | T45_06384 | EamA-like transporter family protein. | Threonine/homoserine exporter RhtA. | 0.826 |
T45_06385 | T45_06383 | T45_06385 | T45_06383 | Clp amino terminal domain protein. | EamA-like transporter family protein. | 0.475 |
T45_06385 | T45_06386 | T45_06385 | T45_06386 | Clp amino terminal domain protein. | Hypothetical protein. | 0.749 |
T45_06385 | coxG | T45_06385 | T45_06387 | Clp amino terminal domain protein. | toxin/MT0934. | 0.686 |
T45_06385 | rhtA_1 | T45_06385 | T45_06384 | Clp amino terminal domain protein. | Threonine/homoserine exporter RhtA. | 0.745 |
T45_06385 | yddE_2 | T45_06385 | T45_09300 | Clp amino terminal domain protein. | Putative isomerase YddE. | 0.529 |
T45_06385 | yqjI_2 | T45_06385 | T45_06388 | Clp amino terminal domain protein. | Transcriptional regulator YqjI. | 0.550 |
T45_06386 | T45_06385 | T45_06386 | T45_06385 | Hypothetical protein. | Clp amino terminal domain protein. | 0.749 |
T45_06386 | coxG | T45_06386 | T45_06387 | Hypothetical protein. | toxin/MT0934. | 0.764 |
T45_06386 | rhtA_1 | T45_06386 | T45_06384 | Hypothetical protein. | Threonine/homoserine exporter RhtA. | 0.674 |
T45_07193 | rhtA_1 | T45_07193 | T45_06384 | CGNR zinc finger. | Threonine/homoserine exporter RhtA. | 0.468 |
T45_08376 | rhtA_1 | T45_08376 | T45_06384 | CGNR zinc finger. | Threonine/homoserine exporter RhtA. | 0.449 |
coxG | T45_06383 | T45_06387 | T45_06383 | toxin/MT0934. | EamA-like transporter family protein. | 0.614 |
coxG | T45_06385 | T45_06387 | T45_06385 | toxin/MT0934. | Clp amino terminal domain protein. | 0.686 |
coxG | T45_06386 | T45_06387 | T45_06386 | toxin/MT0934. | Hypothetical protein. | 0.764 |
coxG | rhtA_1 | T45_06387 | T45_06384 | toxin/MT0934. | Threonine/homoserine exporter RhtA. | 0.687 |
pucR_5 | rhtA_1 | T45_08064 | T45_06384 | Purine catabolism regulatory protein. | Threonine/homoserine exporter RhtA. | 0.496 |
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