Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_06802 | cmdD_1 | T45_06802 | T45_02353 | Cytochrome P450 107B1. | Chondramide synthase cmdD. | 0.993 |
T45_06802 | dhbF_5 | T45_06802 | T45_05169 | Cytochrome P450 107B1. | Dimodular nonribosomal peptide synthase. | 0.960 |
T45_06802 | dhbF_6 | T45_06802 | T45_05170 | Cytochrome P450 107B1. | Dimodular nonribosomal peptide synthase. | 0.933 |
T45_06802 | dhbF_7 | T45_06802 | T45_05171 | Cytochrome P450 107B1. | Dimodular nonribosomal peptide synthase. | 0.954 |
T45_06802 | dhbF_8 | T45_06802 | T45_05484 | Cytochrome P450 107B1. | Dimodular nonribosomal peptide synthase. | 0.999 |
T45_06802 | fas6_1 | T45_06802 | T45_03755 | Cytochrome P450 107B1. | LOG family protein ORF6 in fasciation locus. | 0.989 |
T45_06802 | lgrB | T45_06802 | T45_02352 | Cytochrome P450 107B1. | Linear gramicidin synthase subunit B. | 0.993 |
T45_06802 | lgrD_2 | T45_06802 | T45_05481 | Cytochrome P450 107B1. | Linear gramicidin synthase subunit D. | 0.994 |
T45_06802 | txtA | T45_06802 | T45_09185 | Cytochrome P450 107B1. | Thaxtomin synthase A. | 0.999 |
T45_06802 | txtB | T45_06802 | T45_09184 | Cytochrome P450 107B1. | Thaxtomin synthase B. | 0.999 |
cmdD_1 | T45_06802 | T45_02353 | T45_06802 | Chondramide synthase cmdD. | Cytochrome P450 107B1. | 0.993 |
cmdD_1 | dhbF_5 | T45_02353 | T45_05169 | Chondramide synthase cmdD. | Dimodular nonribosomal peptide synthase. | 0.999 |
cmdD_1 | dhbF_6 | T45_02353 | T45_05170 | Chondramide synthase cmdD. | Dimodular nonribosomal peptide synthase. | 0.998 |
cmdD_1 | dhbF_7 | T45_02353 | T45_05171 | Chondramide synthase cmdD. | Dimodular nonribosomal peptide synthase. | 0.994 |
cmdD_1 | dhbF_8 | T45_02353 | T45_05484 | Chondramide synthase cmdD. | Dimodular nonribosomal peptide synthase. | 0.999 |
cmdD_1 | fas6_1 | T45_02353 | T45_03755 | Chondramide synthase cmdD. | LOG family protein ORF6 in fasciation locus. | 0.999 |
cmdD_1 | lgrB | T45_02353 | T45_02352 | Chondramide synthase cmdD. | Linear gramicidin synthase subunit B. | 0.999 |
cmdD_1 | lgrD_2 | T45_02353 | T45_05481 | Chondramide synthase cmdD. | Linear gramicidin synthase subunit D. | 0.999 |
cmdD_1 | txtA | T45_02353 | T45_09185 | Chondramide synthase cmdD. | Thaxtomin synthase A. | 0.999 |
cmdD_1 | txtB | T45_02353 | T45_09184 | Chondramide synthase cmdD. | Thaxtomin synthase B. | 0.999 |
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