STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_07098Hypothetical protein. (469 aa)    
Predicted Functional Partners:
T45_07099
Polyprenol-phosphate-mannose-dependent.
 
   
 0.951
T45_04363
Acyltransferase family protein.
 
 
 0.720
T45_07263
Acyltransferase family protein.
 
 
 0.714
glsA
Thermolabile glutaminase; Belongs to the glutaminase family.
       0.711
aspA_2
Aspartate ammonia-lyase.
       0.698
lldR_4
Putative L-lactate dehydrogenase operon regulatory protein.
       0.647
T45_07095
L-asparaginase II.
       0.647
hddC_2
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.638
T45_04829
Putative lipid kinase.
 
  
 0.605
rpfA_2
Resuscitation-promoting factor RpfA precursor.
  
     0.587
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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