STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagG_2Teichoic acid translocation permease protein. (310 aa)    
Predicted Functional Partners:
tagH_1
Teichoic acids export ATP-binding protein TagH.
 
 0.999
tagH_2
Teichoic acids export ATP-binding protein TagH.
 
 0.999
tagF
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
  
 0.816
T45_05619
Glycosyl transferase family 2.
 
  
 0.580
T45_07437
Bacterial regulatory proteins, tetR family.
       0.577
T45_05313
ABC transporter ATP-binding/permease protein.
    
  0.553
T45_07947
ABC transporter ATP-binding/permease protein.
    
  0.553
T45_07495
Hypothetical protein.
 
  
 0.534
T45_01492
Hypothetical protein.
  
  
 0.512
T45_03210
Hypothetical protein.
  
  
 0.512
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.