STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celS_2Endoglucanase S precursor; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (239 aa)    
Predicted Functional Partners:
T45_08070
Xyloglucanase precursor.
 
 
  0.940
lipO_2
Lipoprotein LipO precursor.
 
     0.767
xlnA_1
Endo-1,4-beta-xylanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.766
T45_00216
Cellulase (glycosyl hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.761
pelA_3
Pectate lyase A precursor.
  
  0.747
pelA_1
Pectate lyase A precursor.
  
  0.741
yteP
Putative multiple-sugar transport system.
       0.698
araQ_19
L-arabinose transport system permease protein.
       0.698
xlnB
Endo-1,4-beta-xylanase B precursor; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.697
abfB_1
Extracellular exo-alpha-L-arabinofuranosidase precursor.
  
     0.683
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.