Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_09072 | arlS_1 | T45_09072 | T45_02058 | Sensory histidine kinase AtoS. | Signal transduction histidine-protein kinase. | 0.923 |
T45_09072 | barA_2 | T45_09072 | T45_05328 | Sensory histidine kinase AtoS. | Signal transduction histidine-protein kinase. | 0.999 |
T45_09072 | cusS_1 | T45_09072 | T45_05449 | Sensory histidine kinase AtoS. | Sensor kinase CusS. | 0.803 |
T45_09072 | luxQ | T45_09072 | T45_00537 | Sensory histidine kinase AtoS. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
T45_09072 | mprB_2 | T45_09072 | T45_06594 | Sensory histidine kinase AtoS. | Signal transduction histidine-protein. | 0.770 |
T45_09072 | mtrB_1 | T45_09072 | T45_01550 | Sensory histidine kinase AtoS. | Sensor histidine kinase MtrB. | 0.822 |
T45_09072 | tcrX_6 | T45_09072 | T45_08307 | Sensory histidine kinase AtoS. | Putative transcriptional regulatory protein. | 0.983 |
T45_09072 | tcrY_3 | T45_09072 | T45_03741 | Sensory histidine kinase AtoS. | Putative sensor histidine kinase TcrY. | 0.776 |
T45_09072 | tcrY_4 | T45_09072 | T45_07603 | Sensory histidine kinase AtoS. | Putative sensor histidine kinase TcrY. | 0.776 |
arlS_1 | T45_09072 | T45_02058 | T45_09072 | Signal transduction histidine-protein kinase. | Sensory histidine kinase AtoS. | 0.923 |
arlS_1 | barA_2 | T45_02058 | T45_05328 | Signal transduction histidine-protein kinase. | Signal transduction histidine-protein kinase. | 0.992 |
arlS_1 | luxQ | T45_02058 | T45_00537 | Signal transduction histidine-protein kinase. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.966 |
arlS_1 | tcrX_6 | T45_02058 | T45_08307 | Signal transduction histidine-protein kinase. | Putative transcriptional regulatory protein. | 0.807 |
barA_2 | T45_09072 | T45_05328 | T45_09072 | Signal transduction histidine-protein kinase. | Sensory histidine kinase AtoS. | 0.999 |
barA_2 | arlS_1 | T45_05328 | T45_02058 | Signal transduction histidine-protein kinase. | Signal transduction histidine-protein kinase. | 0.992 |
barA_2 | cusS_1 | T45_05328 | T45_05449 | Signal transduction histidine-protein kinase. | Sensor kinase CusS. | 0.998 |
barA_2 | luxQ | T45_05328 | T45_00537 | Signal transduction histidine-protein kinase. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
barA_2 | mprB_2 | T45_05328 | T45_06594 | Signal transduction histidine-protein kinase. | Signal transduction histidine-protein. | 0.980 |
barA_2 | mtrB_1 | T45_05328 | T45_01550 | Signal transduction histidine-protein kinase. | Sensor histidine kinase MtrB. | 0.998 |
barA_2 | tcrX_6 | T45_05328 | T45_08307 | Signal transduction histidine-protein kinase. | Putative transcriptional regulatory protein. | 0.997 |
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