Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_03156 | dhbF_8 | T45_03156 | T45_05484 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Dimodular nonribosomal peptide synthase. | 0.999 |
T45_03156 | lgrD_2 | T45_03156 | T45_05481 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Linear gramicidin synthase subunit D. | 0.999 |
T45_03156 | pks2 | T45_03156 | T45_01967 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Phthioceranic/hydroxyphthioceranic acid. | 0.996 |
T45_03156 | txtA | T45_03156 | T45_09185 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Thaxtomin synthase A. | 0.999 |
T45_03156 | txtB | T45_03156 | T45_09184 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Thaxtomin synthase B. | 0.999 |
T45_03156 | xylF_5 | T45_03156 | T45_08551 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 2-hydroxymuconate semialdehyde hydrolase. | 0.670 |
T45_03156 | ycgJ_2 | T45_03156 | T45_08549 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Putative methyltransferase YcgJ. | 0.498 |
cmpR_2 | ssuD_4 | T45_08552 | T45_08550 | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | Alkanesulfonate monooxygenase. | 0.743 |
cmpR_2 | xylF_5 | T45_08552 | T45_08551 | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | 2-hydroxymuconate semialdehyde hydrolase. | 0.680 |
cmpR_2 | ycgJ_2 | T45_08552 | T45_08549 | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | Putative methyltransferase YcgJ. | 0.665 |
dhbF_8 | T45_03156 | T45_05484 | T45_03156 | Dimodular nonribosomal peptide synthase. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.999 |
dhbF_8 | lgrD_2 | T45_05484 | T45_05481 | Dimodular nonribosomal peptide synthase. | Linear gramicidin synthase subunit D. | 0.999 |
dhbF_8 | pks2 | T45_05484 | T45_01967 | Dimodular nonribosomal peptide synthase. | Phthioceranic/hydroxyphthioceranic acid. | 0.999 |
dhbF_8 | rbsA_6 | T45_05484 | T45_07028 | Dimodular nonribosomal peptide synthase. | Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family. | 0.446 |
dhbF_8 | ssuD_4 | T45_05484 | T45_08550 | Dimodular nonribosomal peptide synthase. | Alkanesulfonate monooxygenase. | 0.826 |
dhbF_8 | txtA | T45_05484 | T45_09185 | Dimodular nonribosomal peptide synthase. | Thaxtomin synthase A. | 0.999 |
dhbF_8 | txtB | T45_05484 | T45_09184 | Dimodular nonribosomal peptide synthase. | Thaxtomin synthase B. | 0.999 |
dhbF_8 | xylF_5 | T45_05484 | T45_08551 | Dimodular nonribosomal peptide synthase. | 2-hydroxymuconate semialdehyde hydrolase. | 0.895 |
dhbF_8 | ycgJ_2 | T45_05484 | T45_08549 | Dimodular nonribosomal peptide synthase. | Putative methyltransferase YcgJ. | 0.876 |
lgrD_2 | T45_03156 | T45_05481 | T45_03156 | Linear gramicidin synthase subunit D. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.999 |
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