STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR48383.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
ARR50234.1
Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
ARR49270.1
Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
ARR50236.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.644
ARR48146.1
Cytochrome c4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
ARR48167.1
Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.616
ARR49495.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
ARR49267.1
Cytochrome biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.513
ARR50514.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
ARR50235.1
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.491
ARR48961.1
YciK family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
Your Current Organism:
Photobacterium damselae
NCBI taxonomy Id: 85581
Other names: Listonella damsela, Listonella damselae, P. damselae subsp. damselae, Photobacterium damsela subsp. damsela, Photobacterium damselae subsp. damselae, Photobacterium histaminum, Vibrio damsela, Vibrio damselae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.