Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARR48535.1Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)    
Predicted Functional Partners:
ARR48534.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.842
ARR48531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.810
ARR48532.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
ARR48533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.808
ARR48536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
ARR48537.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
ARR48538.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.755
ARR48539.1
Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
ARR48540.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.678
Your Current Organism:
Photobacterium damselae
NCBI taxonomy Id: 85581
Other names: Listonella damsela, Listonella damselae, P. damselae subsp. damselae, Photobacterium damsela subsp. damsela, Photobacterium damselae subsp. damselae, Photobacterium histaminum, Vibrio damsela, Vibrio damselae
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.