STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR48908.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
ARR48906.1
Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.707
ARR48907.1
N-acetylmannosamine kinase; Catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.650
ARR48905.1
N-acetylmannosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.488
ARR48904.1
N-acetylneuraminate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.472
ARR50081.1
Two-component system response regulator YehT; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
ARR50080.1
Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
ARR51378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
Your Current Organism:
Photobacterium damselae
NCBI taxonomy Id: 85581
Other names: Listonella damsela, Listonella damselae, P. damselae subsp. damselae, Photobacterium damsela subsp. damsela, Photobacterium damselae subsp. damselae, Photobacterium histaminum, Vibrio damsela, Vibrio damselae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.