Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARR48143.1 | ARR49387.1 | CAY62_00015 | CAY62_07220 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |
ARR48598.1 | ARR49387.1 | CAY62_02840 | CAY62_07220 | Iron-sulfur cluster scaffold-like protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
ARR49172.1 | ARR49387.1 | CAY62_06030 | CAY62_07220 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
ARR49386.1 | ARR49387.1 | CAY62_07215 | CAY62_07220 | Phosphoethanolamine transferase EptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.492 |
ARR49387.1 | ARR48143.1 | CAY62_07220 | CAY62_00015 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.455 |
ARR49387.1 | ARR48598.1 | CAY62_07220 | CAY62_02840 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron-sulfur cluster scaffold-like protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.442 |
ARR49387.1 | ARR49172.1 | CAY62_07220 | CAY62_06030 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
ARR49387.1 | ARR49386.1 | CAY62_07220 | CAY62_07215 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoethanolamine transferase EptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.492 |