STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR49550.1Phage shock protein PspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)    
Predicted Functional Partners:
ARR49548.1
Envelope stress response membrane protein PspC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
ARR49549.1
Envelope stress response membrane protein PspB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
ARR48419.1
Aerobic respiration two-component sensor histidine kinase ArcB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.903
ARR50113.1
Two-component sensor histidine kinase BarA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.874
ARR49551.1
Phage shock protein operon transcriptional activator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.741
ARR49552.1
Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.474
ARR49546.1
TIGR01620 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.451
ARR49547.1
Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.428
Your Current Organism:
Photobacterium damselae
NCBI taxonomy Id: 85581
Other names: Listonella damsela, Listonella damselae, P. damselae subsp. damselae, Photobacterium damsela subsp. damsela, Photobacterium damselae subsp. damselae, Photobacterium histaminum, Vibrio damsela, Vibrio damselae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.