STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR50411.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
lpxM
lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.
       0.529
ARR50491.1
Coniferyl-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.523
ARR50412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
ARR50413.1
Epitope biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
ARR50414.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
ARR48704.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
ARR50415.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
ARR50416.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
ARR50417.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
ARR50418.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
Your Current Organism:
Photobacterium damselae
NCBI taxonomy Id: 85581
Other names: Listonella damsela, Listonella damselae, P. damselae subsp. damselae, Photobacterium damsela subsp. damsela, Photobacterium damselae subsp. damselae, Photobacterium histaminum, Vibrio damsela, Vibrio damselae
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.