STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR50903.1Cobalamin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)    
Predicted Functional Partners:
ARR50901.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.977
ARR50902.1
Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.976
ARR49476.1
Vitamin B12 ABC transporter permease BtuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.922
ARR51332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.834
ARR49139.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.788
ARR51333.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.779
ARR50713.1
Vitamin B12 ABC transporter ATP-binding protein BtuD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.542
ARR49732.1
Oligopeptide ABC transporter substrate-binding protein OppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.513
ARR50804.1
Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.502
ARR50654.1
Thiamine/thiamine pyrophosphate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.494
Your Current Organism:
Photobacterium damselae
NCBI taxonomy Id: 85581
Other names: Listonella damsela, Listonella damselae, P. damselae subsp. damselae, Photobacterium damsela subsp. damsela, Photobacterium damselae subsp. damselae, Photobacterium histaminum, Vibrio damsela, Vibrio damselae
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