ARR51100.1 protein (Photobacterium damselae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ARR51100.1

ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)

Predicted Functional Partners:

ARR51099.1

0.999

ARR51098.1

0.998

ARR51101.1

0.913

ARR50246.1

0.850

ARR49732.1

0.780

ARR51097.1

0.777

ARR50179.1

0.775

ARR51457.1

0.690

ARR50843.1

0.685

ARR51303.1

0.615

Your Current Organism:

Photobacterium damselae

NCBI taxonomy Id: 85581
Other names: Listonella damsela, Listonella damselae, P. damselae subsp. damselae, Photobacterium damsela subsp. damsela, Photobacterium damselae subsp. damselae, Photobacterium histaminum, Vibrio damsela, Vibrio damselae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARR49732.1	ARR50843.1	CAY62_09215	CAY62_15225	Oligopeptide ABC transporter substrate-binding protein OppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
ARR49732.1	ARR51099.1	CAY62_09215	CAY62_16675	Oligopeptide ABC transporter substrate-binding protein OppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.682
ARR49732.1	ARR51100.1	CAY62_09215	CAY62_16680	Oligopeptide ABC transporter substrate-binding protein OppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
ARR49732.1	ARR51303.1	CAY62_09215	CAY62_17900	Oligopeptide ABC transporter substrate-binding protein OppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
ARR50179.1	ARR50246.1	CAY62_12095	CAY62_12455	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
ARR50179.1	ARR50843.1	CAY62_12095	CAY62_15225	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
ARR50179.1	ARR51098.1	CAY62_12095	CAY62_16670	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrogenase expression protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
ARR50179.1	ARR51100.1	CAY62_12095	CAY62_16680	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
ARR50179.1	ARR51303.1	CAY62_12095	CAY62_17900	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.455
ARR50246.1	ARR50179.1	CAY62_12455	CAY62_12095	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
ARR50246.1	ARR51100.1	CAY62_12455	CAY62_16680	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
ARR50246.1	ARR51303.1	CAY62_12455	CAY62_17900	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.592
ARR50246.1	ARR51457.1	CAY62_12455	CAY62_18780	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.873
ARR50843.1	ARR49732.1	CAY62_15225	CAY62_09215	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter substrate-binding protein OppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
ARR50843.1	ARR50179.1	CAY62_15225	CAY62_12095	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
ARR50843.1	ARR51098.1	CAY62_15225	CAY62_16670	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrogenase expression protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.455
ARR50843.1	ARR51099.1	CAY62_15225	CAY62_16675	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
ARR50843.1	ARR51100.1	CAY62_15225	CAY62_16680	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685
ARR50843.1	ARR51303.1	CAY62_15225	CAY62_17900	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
ARR50843.1	ARR51457.1	CAY62_15225	CAY62_18780	ABC transporter ATP-binding protein; With malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852

page 1 of 4

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Databases

Fusion

Textmining

Cooccurrence

Experiments

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About