STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK52969.1KEGG: scl:sce4551 protein kinase. (787 aa)    
Predicted Functional Partners:
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.848
ACK52970.1
KEGG: disease resistance protein (TIR-NBS-LRR class), putative.
       0.773
ACR01525.1
PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: azo:azo2742 putative negative regulator of flagellin synthesis FlgM.
  
 
 0.743
ACK52872.1
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.
   
 0.690
ACR01526.1
PFAM: FlgN family protein; KEGG: azo:azo2743 putative chaperon of flagellar synthesis.
  
  
 0.671
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.635
ACK54382.1
KEGG: scl:sce4001 hypothetical protein.
  
 0.622
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
  0.615
ACK54044.1
PFAM: RNA-metabolising metallo-beta-lactamase; beta-lactamase domain protein; KEGG: eba:ebA5139 metallo-beta-lactamase superfamily protein.
    
 0.610
ACR01767.1
Exonuclease of the beta-lactamase fold involved in RNA processing-like protein; KEGG: dds:Ddes_2033 beta-lactamase domain protein.
    
 0.610
Your Current Organism:
Thauera sp. MZ1T
NCBI taxonomy Id: 85643
Other names: T. sp. MZ1T
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