STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK53628.1PFAM: 37kDa nucleoid-associated protein; KEGG: azo:azo0190 hypothetical protein. (338 aa)    
Predicted Functional Partners:
ACK53556.1
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: azo:azo0422 hypothetical protein.
  
     0.734
ACR01380.1
KEGG: azo:azo3166 hypothetical protein.
  
     0.698
ACK53024.1
KEGG: azo:azo0166 hypothetical protein.
  
     0.671
ACK54902.1
KEGG: dar:Daro_3188 hypothetical protein.
  
     0.635
ACK54366.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: azo:azo3182 hypothetical protein.
  
     0.618
ACR02215.1
KEGG: azo:azo0760 hypothetical protein.
 
     0.541
ACR02283.1
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: azo:azo3455 pilus biogenesis protein.
  
     0.511
ACK53629.1
Glucan 1,3-beta-glucosidase; PFAM: glycoside hydrolase family 5; KEGG: azo:azo2311 putative glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.504
ACR02185.1
PFAM: protein of unknown function DUF181; OsmC family protein; KEGG: azo:azo0039 hypothetical protein.
  
    0.498
rlmM
Putative RNA 2'-O-ribose methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.
  
    0.484
Your Current Organism:
Thauera sp. MZ1T
NCBI taxonomy Id: 85643
Other names: T. sp. MZ1T
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.